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Feature Type

Features can be of different types. Those that only cover one nucleotide are defined as point features while features covering more than one nucleotide are segment features. While there can be gaps between features in sparse sets, contiguous feature sets cover the entire genome.

Point Sparse








3D Genome Browser 3dViewer Apollo BedSect CEpBrowser CGView CGView Server Circos Civi ClicO Free Service CNVkit Cooler Dalliance DNAPlotter Ensembl EpiViz Galaxy HiCExplorer GBrowse GenomeView GenPlay ggBio GIVE HiGlass HilbertCurve HilbertVis HiPiler HUGIn IGB Integrative Genomics Viewer Island Viewer J-Circos JalView JBrowse JuiceBox Juiceboxjs Lollipop Plot cBio MAGI MEME MEXPRESS MicroScope MizBee MochiView my5c NCBI Genome Viewer NCBI Sequence Viewer Oviz-Bio Persephone PSU 3D Genome Browser Rondo Sashimi Plot Savant Genome Browser 2 SCGV SilkDB 3.0 SplicePlot trackViewer UCSC Genome Browser Variant View VCF Plotein VistaPoint WashU Epigenome Browser Xena




Segment Sparse








3D Genome Browser 3dViewer Apollo BedSect CEpBrowser CGView CGView Server Cinteny Circos Civi ClicO Free Service CNVkit Cooler CRAMER Dalliance DNAPlotter EaSeq Edgar Genome Browser Ensembl EpiViz Galaxy HiCExplorer GBrowse GBrowse_syn GenomeRing GenomeView genoPlotR GenPlay Gepard ggBio GIVE Gremlin GView HiGlass HilbertCurve HilbertVis HiPiler HUGIn IGB Integrative Genomics Viewer IRScope Island Viewer J-Circos JalView JBrowse JuiceBox Juiceboxjs Lollipop Plot cBio MAGI MEXPRESS MGcV MicroScope MizBee MochiView my5c NCBI Genome Viewer NCBI Sequence Viewer Oviz-Bio Persephone PSU 3D Genome Browser ReadXplorer RIdeogram Rondo Sashimi Plot Savant Genome Browser 2 SCGV SilkDB 3.0 Spatial DB SpliceGrapher SplicePlot SpliceSeq SWAV SynteBase and SynteView Synteny Explorer trackViewer UCSC Genome Browser Variant View Vista Synteny VistaPoint WashU Epigenome Browser Xena




Point Contiguous









3dViewer AliView Alvis Apollo BedSect CEpBrowser CGView CGView Server Circos Civi ClicO Free Service CNVkit Cooler CRISPResso2 Dalliance Deep Motif Dashboard deepTools Heatmap DNAPlotter EaSeq EnrichedHeatmap Ensembl EpiViz Galaxy HiCExplorer GBrowse GenomeView ggBio GIVE GView HiGlass HilbertCurve HilbertVis HiPiler HUGIn IGB Integrative Genomics Viewer Island Viewer J-Circos JalView JBrowse JuiceBox Juiceboxjs MEME MEXPRESS MicroScope MochiView MSAViewer my5c NCBI Genome Viewer NCBI Sequence Viewer Oviz-Bio Persephone pLogo PSU 3D Genome Browser ReadXplorer Rondo Savant Genome Browser 2 SCGV Sequence Bundles SilkDB 3.0 SplicePlot TFmotifView trackViewer Two Sample Logo UCSC Genome Browser VistaPoint WashU Epigenome Browser WebLogo




Segment Contiguous









3dViewer Apollo BedSect CEpBrowser CGView Server Circos Civi ClicO Free Service CNVkit Cooler Dalliance Deep Motif Dashboard DNAPlotter Edgar Synteny Plots Ensembl EpiViz Galaxy HiCExplorer GBrowse GenomeRing GenomeView Gepard ggBio GIVE Gremlin HiGlass HilbertCurve HilbertVis HiPiler HUGIn IGB Integrative Genomics Viewer IRScope Island Viewer J-Circos JalView JBrowse JuiceBox Juiceboxjs MEXPRESS MicroScope my5c NCBI Genome Viewer NCBI Sequence Viewer ngs.plot Oviz-Bio Persephone PSU 3D Genome Browser Rondo Savant Genome Browser 2 SCGV Sequence Surveyor SilkDB 3.0 SplicePlot svist4get SynMap2 TFmotifView trackViewer UCSC Genome Browser Vista Dot VistaPoint WashU Epigenome Browser