genoPlotR

http://genoplotr.r-forge.r-project.org/screenshots.php

Methods

linear single view single scale single focus segregated partial abstraction linear parallel arrangement between interconnection segment sparse type

Tool

Access Format: “programming library” Supported Files: other License: GPL2 license

Paper

genoPlotR: comparative gene and genome visualization in R

Guy, Lionel, Jens Roat Kultima, and Siv GE Andersson. genoPlotR: comparative gene and genome visualization in R. Bioinformatics 26.18 (2010): 2334-2335.

Cited by: 337

Abstract

Summary: The amount of gene and genome data obtained by next-generation sequencing technologies generates a need for comparative visualization tools. Complementing existing software for comparison and exploration of genomics data, genoPlotR automatically creates publication-grade linear maps of gene and genomes, in a highly automatic, flexible and reproducible way. Availability: genoPlotR is a platform-independent R package, available with full source code under a GPL2 license at R-Forge: http://genoplotr.r-forge.r-project.org/