Dalliance

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3051325/figure/F1/

Methods

linear single view single scale single focus segregated no abstraction no arrangement no interconnection segment sparse type segment contiguous type point sparse type point contiguous type

Tool

Access Format: web application Supported Files: bed Supported Files: sambamcram Supported Files: other License: BSD 2-Clause

Paper

Dalliance: interactive genome viewing on the web.

Down TA, Piipari M, Hubbard TJP. Dalliance: interactive genome viewing on the web. Bioinformatics. academic.oup.com; 2011;27: 889–890.

Cited by: 78

Abstract

SUMMARY: Dalliance is a new genome viewer which offers a high level of interactivity while running within a web browser. All data is fetched using the established distributed annotation system (DAS) protocol, making it easy to customize the browser and add extra data., , AVAILABILITY AND IMPLEMENTATION: Dalliance runs entirely within your web browser, and relies on existing DAS server infrastructure. Browsers for several mammalian genomes are available at http://www.biodalliance.org/, and the use of DAS means you can add your own data to these browsers. In addition, the source code (Javascript) is available under the BSD license, and is straightforward to install on your own web server and embed within other documents.