CGView

http://wishart.biology.ualberta.ca/cgview/gallery.html

Methods

circular single view single scale single focus segregated no abstraction no arrangement no interconnection segment sparse type point sparse type point contiguous type

Tool

Access Format: standalone app Supported Files: txttab Supported Files: other License: unavailable

Paper

Circular genome visualization and exploration using CGView

Stothard P, Wishart DS. Circular genome visualization and exploration using CGView. Bioinformatics. academic.oup.com; 2005;21: 537–539.

Cited by: 471

Abstract

CGView (Circular Genome Viewer) is a Java application and library for generating high-quality, zoomable maps of circular genomes. It converts XML or tab-delimited input into a graphical map (PNG, JPG or Scalable Vector Graphics format), complete with sequence features, labels, legends and footnotes. In addition to the default full view map, the program can generate a series of hyperlinked maps showing expanded views. The linked maps can be explored using any Web browser, allowing rapid genome browsing and facilitating data sharing.