GIVE

https://media.springernature.com/full/springer-static/image/art%3A10.1186%2Fs13059-018-1465-6/MediaObjects/13059_2018_1465_Fig1_HTML.png

Methods

linear multiple view multiple scale single focus segregated no abstraction linear parallel arrangement within interconnection segment sparse type segment contiguous type point sparse type point contiguous type

Tool

Access Format web application programming library
Supported Files other
License Apache License, Version 2.0 (the "License")
Tool name

GIVE
Tool Link https://www.givengine.org/
Documentation https://github.com/Zhong-Lab-UCSD/Genomic-Interactive-Visualization-Engine/tree/master/tutorials

Paper

GIVE: portable genome browsers for personal websites


Abstract

Growing popularity and diversity of genomic data demand portable and versatile genome browsers. Here, we present an open source programming library called GIVE that facilitates the creation of personalized genome browsers without requiring a system administrator. By inserting HTML tags, one can add to a personal webpage interactive visualization of multiple types of genomics data, including genome annotation, “linear” quantitative data, and genome interaction data. GIVE includes a graphical interface called HUG (HTML Universal Generator) that automatically generates HTML code for displaying user chosen data, which can be copy-pasted into user’s personal website or saved and shared with collaborators. GIVE is available at: https://www.givengine.org/.