CGView

http://wishart.biology.ualberta.ca/cgview/gallery.html

Methods

circular single view single scale single focus segregated no abstraction no arrangement no interconnection segment sparse type point sparse type point contiguous type

Tool

Access Format standalone app
Supported Files txttab other
License unavailable
Tool name

CGView
Tool Link http://wishart.biology.ualberta.ca/cgview/
Documentation http://wishart.biology.ualberta.ca/cgview/application.html

Paper

Circular genome visualization and exploration using CGView

Stothard P, Wishart DS. Circular genome visualization and exploration using CGView. Bioinformatics. academic.oup.com; 2005;21: 537–539.

Abstract

CGView (Circular Genome Viewer) is a Java application and library for generating high-quality, zoomable maps of circular genomes. It converts XML or tab-delimited input into a graphical map (PNG, JPG or Scalable Vector Graphics format), complete with sequence features, labels, legends and footnotes. In addition to the default full view map, the program can generate a series of hyperlinked maps showing expanded views. The linked maps can be explored using any Web browser, allowing rapid genome browsing and facilitating data sharing.