MSAViewer

https://academic.oup.com/bioinformatics/article/32/22/3501/2525598

Methods

linear single view single scale single focus contiguous no abstraction no arrangement between interconnection point contiguous type

Tool

Access Format standalone app web application
Supported Files fasta other
License Boost Software
Tool name

MSAViewer
Tool Link http://msa.biojs.net/
Documentation https://youtu.be/ba4Plz8a2sg

Paper

MSAViewer: interactive JavaScript visualization of multiple sequence alignments

Yachdav G, Wilzbach S, Rauscher B, Sheridan R, Sillitoe I, Procter J, et al. MSAViewer: interactive JavaScript visualization of multiple sequence alignments. Bioinformatics. academic.oup.com; 2016;32: 3501–3503.

Abstract

The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is ‘web ready’: written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components.