genoPlotR

http://genoplotr.r-forge.r-project.org/screenshots.php

Methods

linear single view single scale single focus segregated partial abstraction linear parallel arrangement between interconnection segment sparse type

Tool

Access Format “programming library”
Supported Files other
License GPL2 license
Tool name

genoPlotR
Tool Link http://genoplotr.r-forge.r-project.org/
Documentation http://genoplotr.r-forge.r-project.org

Paper

genoPlotR: comparative gene and genome visualization in R

Guy, Lionel, Jens Roat Kultima, and Siv GE Andersson. genoPlotR: comparative gene and genome visualization in R. Bioinformatics 26.18 (2010): 2334-2335.

Abstract

Summary: The amount of gene and genome data obtained by next-generation sequencing technologies generates a need for comparative visualization tools. Complementing existing software for comparison and exploration of genomics data, genoPlotR automatically creates publication-grade linear maps of gene and genomes, in a highly automatic, flexible and reproducible way. Availability: genoPlotR is a platform-independent R package, available with full source code under a GPL2 license at R-Forge: http://genoplotr.r-forge.r-project.org/